Enriched terms on cv. Thompson Seedless
GO accessionTermadj. p-valueDirectional response to GA3 treatment
GO:0051567histone H3-K9 methylation3.9e-14Upregulated
GO:0007017microtubule-based process1.3e-13Upregulated
GO:0051322anaphase1.3e-12Upregulated
GO:0000911cytokinesis by cell plate formation2.9e-12Upregulated
GO:0000910cytokinesis4.3e-12Upregulated
GO:0008283cell proliferation2.6e-11Upregulated
GO:0006306DNA methylation1.7e-10Upregulated
GO:0006304DNA modification1.8e-10Upregulated
GO:0000226microtubule cytoskeleton organization6.5e-10Upregulated
GO:0007010cytoskeleton organization1.3e-09Upregulated
GO:0071554cell wall organization or biogenesis1.4e-09Upregulated
GO:0044036cell wall macromolecule metabolic process1.7e-09Upregulated
GO:0043687post-translational protein modification2.0e-09Upregulated
GO:0006275regulation of DNA replication3.1e-09Upregulated
GO:0010389regulation of G2/M transition of mitotic cell cycle6.3e-09Upregulated
GO:0006270DNA replication initiation7.9e-09Upregulated
GO:0006793phosphorus metabolic process8.3e-09Upregulated
GO:0006260DNA replication8.9e-09Upregulated
GO:0051301cell division2.0e-08Upregulated
GO:0035266meristem growth6.6e-08Upregulated
GO:0040008regulation of growth7.8e-08Upregulated
GO:0051052regulation of DNA metabolic process1.0e-07Upregulated
GO:0016572histone phosphorylation3.8e-07Upregulated
GO:0006261DNA-dependent DNA replication4.6e-07Upregulated
GO:0007167enzyme linked receptor protein signaling pathway5.2e-07Upregulated
GO:0070589cellular component macromolecule biosynthetic process5.2e-07Upregulated
GO:0015979photosynthesis8.7e-07Upregulated
GO:0006325chromatin organization1.1e-06Upregulated
GO:0040029regulation of gene expression, epigenetic1.2e-06Upregulated
GO:0050793regulation of developmental process1.2e-06Upregulated
GO:0051239regulation of multicellular organismal process1.3e-06Upregulated
GO:0048646anatomical structure formation involved in morphogenesis1.5e-06Upregulated
GO:0019684photosynthesis, light reaction1.5e-06Upregulated
GO:0006342chromatin silencing3.1e-06Upregulated
GO:0006534cysteine metabolic process1.4e-05Upregulated
GO:0065007biological regulation1.5e-05Upregulated
GO:0010089xylem development2.2e-05Upregulated
GO:0005976polysaccharide metabolic process5.7e-05Upregulated
GO:0044085cellular component biogenesis6.9e-05Upregulated
GO:0007049cell cycle7.2e-05Upregulated
GO:0009832plant-type cell wall biogenesis7.7e-05Upregulated
GO:0070925organelle assembly7.8e-05Upregulated
GO:0009069serine family amino acid metabolic process8.3e-05Upregulated
GO:0048449floral organ formation1.0e-04Upregulated
GO:0048507meristem development1.3e-04Upregulated
GO:0000271polysaccharide biosynthetic process2.0e-04Upregulated
GO:0009698phenylpropanoid metabolic process2.2e-04Upregulated
GO:0010087phloem or xylem histogenesis2.7e-04Upregulated
GO:0050789regulation of biological process3.7e-04Upregulated
GO:0043414macromolecule methylation3.9e-04Upregulated
GO:0006996organelle organization5.3e-04Upregulated
GO:0032259methylation5.7e-04Upregulated
GO:0040007growth1.1e-03Upregulated
GO:0006259DNA metabolic process1.4e-03Upregulated
GO:0043412macromolecule modification1.6e-03Upregulated
GO:0006730one-carbon metabolic process1.7e-03Upregulated
GO:0070838divalent metal ion transport1.7e-03Upregulated
GO:0032502developmental process5.0e-03Upregulated
GO:0030003cellular cation homeostasis5.3e-03Upregulated
GO:0005975carbohydrate metabolic process8.3e-03Upregulated
GO:0019222regulation of metabolic process9.8e-03Upregulated
GO:0008652cellular amino acid biosynthetic process1.0e-02Upregulated
GO:0006740NADPH regeneration1.0e-02Upregulated
GO:0009926auxin polar transport1.1e-02Upregulated
GO:0019748secondary metabolic process1.2e-02Upregulated
GO:0016128phytosteroid metabolic process1.2e-02Upregulated
GO:0006084acetyl-CoA metabolic process1.2e-02Upregulated
GO:0080090regulation of primary metabolic process1.2e-02Upregulated
GO:0009813flavonoid biosynthetic process1.3e-02Upregulated
GO:0006732coenzyme metabolic process1.4e-02Upregulated
GO:0007389pattern specification process1.4e-02Upregulated
GO:0008202steroid metabolic process1.7e-02Upregulated
GO:0065001specification of axis polarity1.7e-02Upregulated
GO:0006091generation of precursor metabolites and energy1.7e-02Upregulated
GO:0046148pigment biosynthetic process1.9e-02Upregulated
GO:0009309amine biosynthetic process2.0e-02Upregulated
GO:0022900electron transport chain2.0e-02Upregulated
GO:0006769nicotinamide metabolic process2.0e-02Upregulated
GO:0022621shoot system development2.3e-02Upregulated
GO:0006812cation transport2.4e-02Upregulated
GO:0009812flavonoid metabolic process2.7e-02Upregulated
GO:0009825multidimensional cell growth2.9e-02Upregulated
GO:0065008regulation of biological quality2.9e-02Upregulated
GO:0009637response to blue light3.0e-02Upregulated
GO:0009820alkaloid metabolic process3.2e-02Upregulated
GO:0010817regulation of hormone levels3.3e-02Upregulated
GO:0043603cellular amide metabolic process3.4e-02Upregulated
GO:0019438aromatic compound biosynthetic process3.4e-02Upregulated
GO:0051186cofactor metabolic process3.6e-02Upregulated
GO:0009809lignin biosynthetic process3.9e-02Upregulated
GO:0010051xylem and phloem pattern formation4.0e-02Upregulated
GO:0032501multicellular organismal process4.1e-02Upregulated
GO:0006364rRNA processing4.4e-02Upregulated
GO:0007349cellularization4.4e-02Upregulated
GO:0006636unsaturated fatty acid biosynthetic process4.4e-02Upregulated
GO:0000280nuclear division4.7e-02Upregulated
GO:0010200response to chitin2.8e-16Downregulated
GO:0009620response to fungus6.1e-16Downregulated
GO:0006952defense response2.6e-14Downregulated
GO:0010033response to organic substance2.1e-13Downregulated
GO:0009607response to biotic stimulus1.0e-12Downregulated
GO:0002376immune system process2.4e-12Downregulated
GO:0006955immune response2.4e-12Downregulated
GO:0034976response to endoplasmic reticulum stress1.2e-11Downregulated
GO:0006950response to stress2.6e-11Downregulated
GO:0012501programmed cell death6.9e-11Downregulated
GO:0080134regulation of response to stress1.5e-10Downregulated
GO:0050896response to stimulus1.6e-10Downregulated
GO:0008219cell death1.8e-10Downregulated
GO:0034050host programmed cell death induced by symbiont2.0e-10Downregulated
GO:0009626plant-type hypersensitive response2.0e-10Downregulated
GO:0009611response to wounding3.8e-10Downregulated
GO:0006612protein targeting to membrane8.3e-10Downregulated
GO:0009627systemic acquired resistance1.0e-09Downregulated
GO:0031407oxylipin metabolic process1.3e-09Downregulated
GO:0009694jasmonic acid metabolic process1.9e-09Downregulated
GO:0048583regulation of response to stimulus2.9e-09Downregulated
GO:0009605response to external stimulus4.6e-09Downregulated
GO:0051704multi-organism process6.7e-09Downregulated
GO:0033554cellular response to stress6.7e-09Downregulated
GO:0023052signaling5.0e-08Downregulated
GO:0009695jasmonic acid biosynthetic process2.1e-07Downregulated
GO:0009719response to endogenous stimulus2.2e-07Downregulated
GO:0051716cellular response to stimulus3.4e-07Downregulated
GO:0031408oxylipin biosynthetic process4.3e-07Downregulated
GO:0006986response to unfolded protein4.3e-07Downregulated
GO:0009408response to heat5.4e-07Downregulated
GO:0042538hyperosmotic salinity response1.0e-06Downregulated
GO:0045730respiratory burst2.7e-05Downregulated
GO:0044283small molecule biosynthetic process3.4e-05Downregulated
GO:0009697salicylic acid biosynthetic process5.1e-05Downregulated
GO:0009696salicylic acid metabolic process1.5e-04Downregulated
GO:0052545callose localization2.4e-04Downregulated
GO:0033037polysaccharide localization2.8e-04Downregulated
GO:0006865amino acid transport3.1e-04Downregulated
GO:0015837amine transport3.9e-04Downregulated
GO:0006725cellular aromatic compound metabolic process6.8e-04Downregulated
GO:0046394carboxylic acid biosynthetic process7.4e-04Downregulated
GO:0032787monocarboxylic acid metabolic process9.1e-04Downregulated
GO:0015849organic acid transport1.0e-03Downregulated
GO:0009693ethylene biosynthetic process1.1e-03Downregulated
GO:0010583response to cyclopentenone1.6e-03Downregulated
GO:0050794regulation of cellular process1.8e-03Downregulated
GO:0010035response to inorganic substance2.2e-03Downregulated
GO:0009404toxin metabolic process3.7e-03Downregulated
GO:0009407toxin catabolic process3.7e-03Downregulated
GO:0042542response to hydrogen peroxide3.7e-03Downregulated
GO:0009595detection of biotic stimulus7.0e-03Downregulated
GO:0009644response to high light intensity7.0e-03Downregulated
GO:0010150leaf senescence7.1e-03Downregulated
GO:0006767water-soluble vitamin metabolic process9.2e-03Downregulated
GO:0046482para-aminobenzoic acid metabolic process1.1e-02Downregulated
GO:0019438aromatic compound biosynthetic process1.1e-02Downregulated
GO:0006082organic acid metabolic process1.2e-02Downregulated
GO:0006631fatty acid metabolic process1.3e-02Downregulated
GO:0009642response to light intensity1.4e-02Downregulated
GO:0006810transport1.4e-02Downregulated
GO:0006820anion transport1.4e-02Downregulated
GO:0042180cellular ketone metabolic process1.6e-02Downregulated
GO:0006457protein folding1.7e-02Downregulated
GO:0009628response to abiotic stimulus1.8e-02Downregulated
GO:0050789regulation of biological process2.5e-02Downregulated
GO:0051179localization2.6e-02Downregulated
GO:0065007biological regulation2.9e-02Downregulated
GO:0007568aging2.9e-02Downregulated
GO:0043900regulation of multi-organism process3.5e-02Downregulated
GO:0008152metabolic process4.1e-02Downregulated
GO:0010310regulation of hydrogen peroxide metabolic process4.4e-02Downregulated
GO:0006979response to oxidative stress4.6e-02Downregulated